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Species belonging to selected taxon:

Arachis ipaensis



ABOUT THIS RECORD

ID: MNEST000147
species: Arachis ipaensis
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTTCC

miRNA*
AAGACGTCATGATGGAACGC

mismatches: 5
bulges: 1

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pre-miRNA
CCCCTTACGGCCGGGGAACGCTCTATAGTATTATCCAAAAAATTCATTGATAATGGAAGACGTCATGATGGAACGCTCTAAATCATCATCATCATCATCA
TCATCTTCC
AGCTAATGTTGTTTACAGCTTAGTCTCCAAATACACCAATTGTGTTCTTATCTCCTTTT


dot-bracket secondary structure
((((........))))...(((....))).(((((.............))))).((((((.((.(((((((....................))))))).)
)..))))))
.(((((.((((....))))))))).....((((((.....)))))).............



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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